Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs4990735 | chr1:209943592 | C/T | 0.000209 | 204 | 14.1 | 19.9 | 16.83 | KM Plot |
KIRP | rs4995030 | chr15:24514467 | G/A | 0.000173 | 209 | 17.52 | 14.1 | 10.63 | KM Plot |
KIRP | rs5008713 | chr15:24504062 | G/C | 0.000544 | 213 | 16.97 | 14.53 | 9.48 | KM Plot |
KIRP | rs5030890 | chr10:70670776 | C/T | 6.91E-9 | 214 | 15.07 | 17 | 10.6 | KM Plot |
KIRP | rs508324 | chr11:34854066 | G/A | 0.000552 | 214 | 6.7 | 17.73 | 15.33 | KM Plot |
KIRP | rs55663552 | chr1:49026880 | T/A | 9.06E-5 | 207 | 14.87 | 16.43 | 11.77 | KM Plot |
KIRP | rs55679149 | chr1:89534338 | C/T | 2.66E-5 | 212 | 16.97 | 17.52 | 10 | KM Plot |
KIRP | rs55679760 | chr6:110796969 | T/G | 0.00031 | 209 | 18 | 13.17 | 6.13 | KM Plot |
KIRP | rs55681405 | chr17:80841895 | G/T | 0.00011 | 210 | 15.1 | 17.2 | 13.17 | KM Plot |
KIRP | rs55706012 | chr6:26266311 | A/C | 2.32E-7 | 208 | 16.45 | 16.43 | 9.77 | KM Plot |
KIRP | rs55754265 | chr3:49687486 | C/T | 6.53E-5 | 207 | 16.5 | 15.88 | 8.73 | KM Plot |
KIRP | rs55774143 | chr11:34806170 | C/A | 0 | 214 | 15.2 | 17.73 | 3.83 | KM Plot |
KIRP | rs55797308 | chr14:96055564 | G/A | 1.01E-6 | 212 | 14.83 | 26.57 | 9.77 | KM Plot |
KIRP | rs55810554 | chr16:4524392 | C/T | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
KIRP | rs55845132 | chr1:87671571 | G/A | 0.000242 | 211 | 14.53 | 29.42 | 9.25 | KM Plot |